Surface NMR forward modelling
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LayeredEarthMR.cpp 5.3KB

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  1. /* This file is part of Lemma, a geophysical modelling and inversion API.
  2. * More information is available at http://lemmasoftware.org
  3. */
  4. /* This Source Code Form is subject to the terms of the Mozilla Public
  5. * License, v. 2.0. If a copy of the MPL was not distributed with this
  6. * file, You can obtain one at http://mozilla.org/MPL/2.0/.
  7. */
  8. /**
  9. * @file
  10. * @date 08/28/2017 03:32:34 PM
  11. * @version $Id$
  12. * @author Trevor Irons (ti)
  13. * @email tirons@egi.utah.edu
  14. * @copyright Copyright (c) 2017, University of Utah
  15. * @copyright Copyright (c) 2017, Lemma Software, LLC
  16. */
  17. #include "LayeredEarthMR.h"
  18. namespace Lemma {
  19. // ==================== FRIEND METHODS =====================
  20. std::ostream &operator << (std::ostream &stream, const LayeredEarthMR &ob) {
  21. stream << ob.Serialize() << "\n---\n"; // End of doc ---
  22. return stream;
  23. }
  24. // ==================== LIFECYCLE =======================
  25. //--------------------------------------------------------------------------------------
  26. // Class: LayeredEarthMR
  27. // Method: LayeredEarthMR
  28. // Description: constructor (locked)
  29. //--------------------------------------------------------------------------------------
  30. LayeredEarthMR::LayeredEarthMR (const ctor_key&) : LayeredEarth( ) {
  31. } // ----- end of method LayeredEarthMR::LayeredEarthMR (constructor) -----
  32. //--------------------------------------------------------------------------------------
  33. // Class: LayeredEarthMR
  34. // Method: LayeredEarthMR
  35. // Description: DeSerializing constructor (locked)
  36. //--------------------------------------------------------------------------------------
  37. LayeredEarthMR::LayeredEarthMR (const YAML::Node& node, const ctor_key&) : LayeredEarth(node) {
  38. } // ----- end of method LayeredEarthMR::LayeredEarthMR (constructor) -----
  39. //--------------------------------------------------------------------------------------
  40. // Class: LayeredEarthMR
  41. // Method: NewSP()
  42. // Description: public constructor returing a shared_ptr
  43. //--------------------------------------------------------------------------------------
  44. std::shared_ptr< LayeredEarthMR > LayeredEarthMR::NewSP() {
  45. return std::make_shared< LayeredEarthMR >( ctor_key() );
  46. }
  47. //--------------------------------------------------------------------------------------
  48. // Class: LayeredEarthMR
  49. // Method: ~LayeredEarthMR
  50. // Description: destructor (protected)
  51. //--------------------------------------------------------------------------------------
  52. LayeredEarthMR::~LayeredEarthMR () {
  53. } // ----- end of method LayeredEarthMR::~LayeredEarthMR (destructor) -----
  54. //--------------------------------------------------------------------------------------
  55. // Class: LayeredEarthMR
  56. // Method: Serialize
  57. //--------------------------------------------------------------------------------------
  58. YAML::Node LayeredEarthMR::Serialize ( ) const {
  59. YAML::Node node = LayeredEarth::Serialize();
  60. node.SetTag( GetName() );
  61. // FILL IN CLASS SPECIFICS HERE
  62. node["Merlin_VERSION"] = MERLIN_VERSION;
  63. node["T2StarBins"] = T2StarBins;
  64. node["T2StarBinEdges"] = T2StarBinEdges;
  65. return node;
  66. } // ----- end of method LayeredEarthMR::Serialize -----
  67. //--------------------------------------------------------------------------------------
  68. // Class: LayeredEarthMR
  69. // Method: DeSerialize
  70. //--------------------------------------------------------------------------------------
  71. std::shared_ptr<LayeredEarthMR> LayeredEarthMR::DeSerialize ( const YAML::Node& node ) {
  72. if (node.Tag() != "LayeredEarthMR" ) {
  73. throw DeSerializeTypeMismatch( "LayeredEarthMR", node.Tag());
  74. }
  75. return std::make_shared< LayeredEarthMR > ( node, ctor_key() );
  76. } // ----- end of method LayeredEarthMR::DeSerialize -----
  77. //--------------------------------------------------------------------------------------
  78. // Class: LayeredEarthMR
  79. // Method: SetNumberOfLayers
  80. //--------------------------------------------------------------------------------------
  81. void LayeredEarthMR::SetNumberOfLayers ( const int& nlay ) {
  82. return ;
  83. } // ----- end of method LayeredEarthMR::SetNumberOfLayers -----
  84. //--------------------------------------------------------------------------------------
  85. // Class: LayeredEarthMR
  86. // Method: SetNumberOfT2StarBins
  87. //--------------------------------------------------------------------------------------
  88. void LayeredEarthMR::SetT2StarBins ( const Real& first, const Real& last, const int& nT2 ) {
  89. T2StarBinEdges = VectorXr::Zero(nT2+1);
  90. Real m = 1./(nT2);
  91. Real quotient = std::pow(last/first, m);
  92. T2StarBinEdges[0] = first;
  93. for (int i=1; i<nT2+1; ++i) {
  94. T2StarBinEdges[i] = T2StarBinEdges[i-1]*quotient;
  95. }
  96. T2StarBins = (T2StarBinEdges.head(nT2) + T2StarBinEdges.tail(nT2)) / 2;
  97. return;
  98. } // ----- end of method LayeredEarthMR::SetNumberOfT2StarBins -----
  99. } // ---- end of namespace Lemma ----
  100. /* vim: set tabstop=4 expandtab: */
  101. /* vim: set filetype=cpp: */